PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100262240071
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 74aa    MW: 8394.6 Da    PI: 11.0629
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100262240071genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.41.6e-152369455
                                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                                   hn  E+rRR+riN++   L+ l+P++      K +Ka++L  A++Y+k+Lq
  Ote100262240071|100262240071 23 VHNLSEKRRRSRINEKKKALQNLIPNS-----NKTDKASMLDDAIDYLKQLQ 69
                                  6*************************7.....5******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.37E-191673IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.1041968IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.88E-112273No hitNo description
Gene3DG3DSA:4.10.280.101.9E-182373IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.9E-132369IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.3E-162574IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 74 aa     Download sequence    Send to blast
MAESAAKSAP RRCSSKRSRA AEVHNLSEKR RRSRINEKKK ALQNLIPNSN KTDKASMLDD  60
AIDYLKQLQL QVQA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007047305.12e-34Homeodomain-like superfamily protein isoform 2
RefseqXP_010652804.12e-34PREDICTED: transcription factor SPATULA
SwissprotQ9FUA48e-29SPT_ARATH; Transcription factor SPATULA
TrEMBLA0A0D2PD597e-35A0A0D2PD59_G
TrEMBLA0A0D2TJ691e-34A0A0D2TJ69_G
STRINGVIT_07s0031g00450.t016e-34(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA98502227